Browsing by Author "Lachowiec, Jennifer A."

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Redundancy, Feedback, and Robustness in the Arabidopsis thaliana BZR/BEH Gene Family
(2018-11) Lachowiec, Jennifer A.; Mason, G. Alex; Schultz, Karla; Queitsch, Christine
Organismal development is remarkably robust, tolerating stochastic errors to produce consistent, so-called canalized adult phenotypes. The mechanistic underpinnings of developmental robustness are poorly understood, but recent studies implicate certain features of genetic networks such as functional redundancy, connectivity, and feedback. Here, we examine the BZR/BEH gene family, whose function contributes to embryonic stem development in the plant Arabidopsis thaliana, to test current assumptions on functional redundancy and trait robustness. Our analyses of BZR/BEH gene mutants and mutant combinations revealed that functional redundancy among these gene family members is not necessary for trait robustness. Connectivity is another commonly cited determinant of robustness; however, we found no correlation between connectivity among gene family members or their connectivity with other transcription factors and effects on developmental robustness. Instead, our data suggest that BEH4, the earliest diverged family member, modulates developmental robustness. We present evidence indicating that regulatory cross-talk among gene family members is integrated by BEH4 to promote wild-type levels of developmental robustness. Further, the chaperone HSP90, a known determinant of developmental robustness, appears to act via BEH4 in maintaining robustness of embryonic stem length. In summary, we demonstrate that even among closely related transcription factors, trait robustness can arise through the activity of a single gene family member, challenging common assumptions about the molecular underpinnings of robustness.
Relationships between roots, the stay‐green phenotype, and agronomic performance in barley and wheat grown in semi‐arid conditions
(Wiley, 2022-01) Williams, Jessica L.; Sherman, Jamie D.; Lamb, Peggy F.; Cook, Jason; Lachowiec, Jennifer A.; Bourgault, Maryse
Stay-green is a phenotype that crop breeders could use to improve drought adaptation. It increases the duration of grain fill in several species including barley (Hordeum vulgare L.) and wheat (Triticum aestivum L.), maintaining yield in semi-arid conditions. Evidence from controlled environment experiments suggests a connection between stay-green and root systems. These belowground structures are understudied and thus represent opportunity for crop improvement if relationships to agronomics can be understood. Minirhizotrons facilitate study of these relationships by allowing repeated nondestructive root measurements in field conditions. However, this is time-consuming, and proxies would be useful for increasing throughput capacity of root research. Here we present results from field trials with minirhizotrons in a semi-arid environment, as well as greenhouse seedling assays conducted on stay-green and non-stay-green barley and wheat lines. In barley, stay-green and greater yield were primarily associated with greater deep root length and delayed root senescence, whereas in wheat, yield was most strongly correlated with total root length, and root system differences for stay-green were not as apparent. We speculate that the physiology of stay-green is different between these two species, and that barley may use a more efficient root system to withstand drought whereas wheat relies on a larger one. Several seedling traits related consistently to field root traits, but correlation directions were often opposite between barley and wheat. The connections between traits presented here could be useful for breeders seeking to improve crop adaptation to drought, but more genotypes and environments will need to be tested.
Warm-Season Forage Options in Northern Dryland Regions
(2020-06) Carr, Patrick M.; Boss, Darrin L.; Chen, Chengci; Dafoe, Julia M.; Eberly, Jed O.; Fordyce, Simon; Hydner, Roger M.; Fryer, Heather K.; Lachowiec, Jennifer A.; Lamb, Peggy F.; McVay, Kent A.; Khan, Qasim A.; Miller, Perry R.; Miller, Zachariah J.; Torrion, Jessica A.
Rotating summer fallow with wheat (Triticum spp.) is done in dryland grain farming at upper latitudes to stabilize yields over time and to prevent crop failure. However, summer fallow is costly since weeds must be controlled and crops are not grown. Replacing summer fallow with grain crops can generate low economic returns. Previous research indicated that annual cool‐season forages can be substituted for summer fallow in dryland cropping systems. Our objective was to determine if annual warm‐season species were suited for forage production in monocultures and polycultures in the U.S. northern Great Plains. Dry matter (DM) production by 20 warm‐ and cool‐season crop monocultures and 4 polycultures was determined across six environments during 2016, and by 25 warm‐ and cool‐season crop monocultures and polycultures across four environments from 2016 through 2018. Maize (Zea mays L.) monoculture produced forage DM in amounts equal to, or greater than, those produced by other warm‐ and cool‐season crop treatments (P < 0.05). Maize DM production averaged 2.5 to 5.7 Mg ha−1, depending on the study and environment. Sorghum (Sorghum bicolor L.), foxtail millet [Setaria italica (L.) P. Beauv.] and sunflower (Helianthus annuus L.) also produced relatively large amounts of forage DM. Polycultures failed to produce more DM than monocultures consistently (P > 0.40). These results indicate that maize and other warm‐season crops are adapted for dryland forage production in cool regions at upper latitudes. Additional research is needed to determine the impacts of annual warm‐season forages on grain yield in a forage‐wheat crop sequence.