Browsing by Author "Lapidus, Alla"

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    Complete Genome Sequence of Alkaliphilus metalliredigens Strain QYMF, an Alkaliphilic and Metal-Reducing Bacterium Isolated from Borax-Contaminated Leachate Ponds
    (2016-11) Hwang, Chiachi; Copeland, Alex; Lucas, Susan; Lapidus, Alla; Barry, Kerrie; Detter, John C.; Glavina del Rio, Tijana; Hammon, Nancy; Israni, Sanjay; Dalin, Eileen; Tice, Hope; Pitluck, S.; Chertkov, Olga; Brettin, Tom; Bruce, David; Han, C.; Schmutz, Jeremy; Larimer, F.; Land, M. L.; Hauser, Loren; Kyrpides, Nikos; Mikhailova, Natalia; Ye, Qi; Zhou, Jizhong; Richardson, Paul; Fields, Matthew W.
    Alkaliphilus metalliredigens strain QYMF is an anaerobic, alkaliphilic, and metal-reducing bacterium associated with phylum Firmicutes QYMF was isolated from alkaline borax leachate ponds. The genome sequence will help elucidate the role of metal-reducing microorganisms under alkaline environments, a capability that is not commonly observed in metal respiring-microorganisms.
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    High-quality draft genome sequence of Desulfovibrio carbinoliphilus FW-101-2B, an organic acid-oxidizing sulfate-reducing bacterium isolated from uranium(VI)-contaminated groundwater
    (2015-03) Ramsay, Bradley D.; Hwang, Chiachi; Woo, Hannah L.; Carroll, Sue L.; Lucas, Susan; Han, Jie; Lapidus, Alla; Cheng, J. F.; Goodwin, L. A.; Pitluck, S.; Peters, L.; Chertkov, Olga; Held, B; Detter, John C.; Han, C.; Tapia, R.; Land, M. L.; Hauser, Loren; Kyrpides, Nikos; Ivanova, N. N.; Mikhailova, Natalia; Pagani, I.; Woyke, Tanja; Arkin, Adam P.; Dehal, P.; Chivian, D.; Criddle, Craig S.; Wu, Wei-Min; Chakraborty, R.; Hazen, Terry C.; Fields, Matthew W.
    Desulfovibrio carbinoliphilus subsp. oakridgensis FW-101-2B is an anaerobic, organic acid/alcohol-oxidizing, sulfate-reducing d-proteobacterium. FW-101-2B was isolated from contaminated groundwater at The Field Research Center at Oak Ridge National Lab after in situ stimulation for heavy metal-reducing conditions. The genome will help elucidate the metabolic potential of sulfate-reducing bacteria during uranium reduction.
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