Scholarship & Research
Permanent URI for this communityhttps://scholarworks.montana.edu/handle/1/1
Browse
4 results
Search Results
Item Multi-component oxide powder processing dynamics & synergy towards multi-functionality(Montana State University - Bozeman, College of Engineering, 2022) Heywood, Stephen Kevin; Chairperson, Graduate Committee: Stephen W. Sofie; This is a manuscript style paper that includes co-authored chapters.Multi-component or multi-cation ceramic oxides are particularly sensitive to processing-properties variation, in which a single defined chemical stoichiometry can embody dramatic variability in measured properties simply through the steps of synthesis and processing to reach the desired form. Hence, the tailoring of complex oxides is often convoluted by chemical doping and changes in stoichiometry when the influence of processing is not understood. Mixed conducting, multi-valent double perovskite Sr 2-x V Mo O 6-delta (SVMO) shows extraordinary electrical conductivity relative to comparable double perovskites. The technical hurdles of synthesizing and processing bulk powders of SVMO to optimize studies of fundamental electrical transport mechanisms otherwise convoluted by porosity in prior literature were overcome. The basis of various synthesis conditions via rapid microwave assisted sol-gel synthesis were discerned for their contribution to either open porosity of SVMO or enhanced densification. Enhanced resistance to particle coarsening under reducing contrast to inert atmosphere and a means to generate electrical percolation via solid-solution stability of SVMO were two key discoveries among fundamental breakthroughs understanding particle consolidation behaviors. It was discovered that SVMO's elastic modulus was well in excess of other oxide materials, approaching 300 GPa and in correspondence with the mixed V/Mo valency system provides an explanation for low thermal diffusion during sintering. The advanced solid lithium conducting garnet Li 6.25 La 3 Zr 2 Al 0.25 O 12 (LLZO) demonstrates high ionic conductivity for all solid-state batteries, however, it must be paired with an active cathode and anode to enable high energy storage capacity. The study presented here identifies methods to process LLZO materials into dense and porous constituents to satisfy the design architecture of a solid-state battery emphasizing the sensitivity of LLZO performance to lithium content and the desired cubic phase. The aim was to calibrate synthesis techniques towards minimizing sensitivity to thermal processing that contributes towards lithium loss. Studies of sintering optimization and excess lithium content in conjunction with novel freeze based tape casting methods to generate low tortuosity pores were explored. Development of these novel microstructures represents a backbone of processing methodology necessary to incorporate multivalent double perovskites in fuel-electrolysis cells and improve solid state lithium battery technologies.Item Microbial interactions and the role of environmental stress in natural and synthetic consortia(Montana State University - Bozeman, College of Letters & Science, 2018) Beck, Ashley Esther; Chairperson, Graduate Committee: Ross Carlson; Kristopher A. Hunt, Hans C. Bernstein and Ross P. Carlson were co-authors of the chapter, 'Interpreting and designing microbial communities for bioprocess applications, from components to interactions to emergent poperties' in the book 'Biotechnology for biofuel production and optimization' which is contained within this thesis.; Kristopher A. Hunt and Ross P. Carlson were co-authors of the article, 'Measuring cellular biomass composition for computational biology applications' submitted to the journal 'Processes, methods in computational biology special issue' which is contained within this thesis.; Hans C. Bernstein, and Ross P. Carlson were co-authors of the article, 'Stoichiometric network analysis of cyanobacterial acclimation to photosynthesis-associated stresses identifies heterotrophic niches' in the journal 'Processes, microbial community modeling: prediction of microbial interactions and community dynamics special issue' which is contained within this thesis.; Kathryn Pintar, Diana Schepens, Ashley Schrammeck, Tim Johnson, Alissa Bleem, Hans C. Bernstein, Tomas Gedeon, Jeffrey J. Heys and Ross P. Carlson were co-authors of the article, 'Escherichia coli co-metabolizes glucose and lactate for enhanced growth' submitted to the journal 'Applied and Environmental Microbiology' which is contained within this thesis.; Ross P. Carlson was a co-author of the article, 'Synthetic consortia engineered for push and pull dynamics show conditional optimality over metabolic generalist' which is contained within this thesis.Microbial communities are critical underpinnings of most natural processes, e.g. biogeochemical cycling, and can also be harnessed and engineered for a variety of industrial applications. Despite the abundance of detailed physiological characterization of many individual microorganisms, as well as large data sets describing microbial community composition, the area of interspecies interactions requires further research to truly appreciate and harness the potential of microbial capabilities. Using a combination of in silico metabolic modeling and in vitro laboratory approaches linked to guiding ecological theories, this dissertation investigates metabolite exchange as a mechanism of interspecies interactions and focuses on the role of environmental stress in mediating interactions. A stoichiometric metabolic network model was constructed for the thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 and was analyzed with elementary flux mode analysis to predict metabolic acclimations to light and oxygen, two common environmental stressors in photoautotrophic habitats. High stress levels were predicted to activate organic byproduct secretion pathways, which opens a niche to support growth of heterotrophic partners. To further investigate metabolite exchange in the laboratory, synthetic consortia were designed through genetic engineering and pairing of Escherichia coli strains to form metabolically partitioned organic acid cross-feeding systems. These controlled systems were used to investigate the impact of division of labor as well as the effect of byproduct detoxification. Kinetic data from these systems were also applied to interpret ecological theories regarding microbial community structure. Altogether, these studies demonstrate an integrated approach to studying microbial community interactions by combining in silico metabolic modeling and in vitro laboratory experiments with ecological theory as a basis for interpretation. This dissertation provides insight into rationale for microbial community structure and highlights the role of environmental stress, particularly byproduct inhibition, in driving microbial consortia interactions.Item The stoichiometry of nutrient and energy transfer: from organelles to organisms(Montana State University - Bozeman, College of Engineering, 2016) Hunt, Kristopher Allen; Chairperson, Graduate Committee: Ross Carlson; James P. Folsom, Reed L. Taffs and Ross P. Carlson were co-authors of the article, 'Complete enumeration of elementary flux modes through scalable, demand-based subnetwork definition' in the journal 'Bioinformatics' which is contained within this thesis.; Ashley E. Beck was an author and Hans C. Bernstein and Ross P. Carlson were co-authors of the article, 'Interpreting and designing microbial communities for bioprocess applications, from components to interactions to emergent properties' in the journal 'Biotechnology for biofuel production and optimization' which is contained within this thesis.; Ryan deM. Jennings, William P. Inskeep and Ross P. Carlson were co-authors of the article, 'Stoichiometric modeling of assimilatory and dissimilatory biomass utilization in a microbial community' in the journal 'Environmental microbiology' which is contained within this thesis.; Ryan deM. Jennings, William P. Inskeep and Ross P. Carlson were co-authors of the article, 'Multiscale analysis of autotroph-heterotroph interactions in a high-temperature microbial community' submitted to the journal 'The International Society for Microbial Ecology journal' which is contained within this thesis.; Natasha D. Mallette, Brent M. Peyton and Ross P. Carlson were co-authors of the article, 'Theoretical and practical limitations of hydrocarbon production for a cellulolytic, endophytic filamentous fungus' submitted to the journal 'Metabolic engineering' which is contained within this thesis.All life requires the acquisition and transformation of nutrients and energy, driving processes from cellular nutrient flow to planetary biogeochemical cycling. However, the organisms and communities responsible for these processes are often uncultivable and too complex to observe directly and understand. Stoichiometric modeling, a systems biology approach, analyzes the reactions in an organism and incorporates data from multiple sources to extract biologically meaningful parameters, such as theoretical limits of conversion and yields of a metabolism. These limits and yields quantify relationships between organisms to establish governing principles, from resource requirements to community productivity as a function of population composition. The presented work expanded the stoichiometric modeling algorithm and identified fundamental principles that govern nutrient and energy transfer associated with heterotrophy, community composition, and intracellular compartmentalization. A scalable routine capable of analyzing complex metabolic networks by dividing them into tractable subnetworks was demonstrated for a eukaryotic diatom. The metabolic model contained approximately two billion routes through the network and established an international benchmark for elementary flux mode analysis. Additionally, a heterotrophic archaeon was examined for the resource requirements while consuming 29 different forms of biomass derived dissolved organic carbon. These resource requirements and limitations establish a basis to analyze heterotrophy with regard to the limiting nutrient in a variety of systems. The resulting resource requirements of heterotrophy were incorporated into a community where an iron oxidizing autotroph was hypothesized to be the primary source of carbon and energy. Analysis of the community model and in situ measurements of iron and oxygen utilization indicated additional electron donors were required to account for the observed acquisition of nutrients in some communities. Finally, limits and resource requirements for fungal production of hydrocarbons were identified as a function of carbon and energy partitioning using simulated genetic modifications, providing context regarding endophytic production of bioactive molecules for host resistance as well as endophyte capacity as a petroleum producing alternative.Item Coexistence between a native (Valvata humeralis) and a non-native (Potamopyrgus antipodarum) gastropod in the Middle Snake River, Idaho : implications for invasive species impact(Montana State University - Bozeman, College of Letters & Science, 2012) Gates, Kiza Kristine; Chairperson, Graduate Committee: Billie L. Kerans; Billie. L. Kerans was a co-author of the article, 'Spatial, temporal, and diet partitioning combine with environmental stochasticity to enable coexistence between an invasive and a native gastropod' in the journal 'Biological invasions' which is contained within this thesis.; Billie. L. Kerans was a co-author of the article, 'Biotic interaction gradients between native and invasive species' in the journal 'Ecology' which is contained within this thesis.; Billie. L. Kerans was a co-author of the article, 'Competitive and facilitative mechanisms of a biotic interaction gradient' in the journal 'Oecologia' which is contained within this thesis.The dominant competitive abilities of many invasive species are frequently assumed to preclude biologically similar native species over time, but there has been little research exploring how interactions between invasive and native species may change with changes in biotic and abiotic conditions. Introduction of the invasive New Zealand mud snail Potamopyrgus antipodarum in the Snake River in the late 1980's raised many concerns for the native gastropods of this region; however, the native gastropod Valvata humeralis has maintained large populations and continued to coexist with P. antipodarum. I investigated the coexistence of P. antipodarum and V. humeralis in the Vista reach of the Middle Snake River. Diet, spatial, and temporal partitioning of V. humeralis were explored in populations that were invaded by P. antipodarum and uninvaded. A field growth experiment was used to measure the net intra- and interspecific effects of V. humeralis and P. antipodarum at varying densities and species proportions. Results of the field growth experiment were compared with field survey data. A laboratory growth experiment and a stoichiometric experiment were used to identify the interaction mechanisms between species. Valvata humeralis juveniles appeared to shift diet in the presence P. antipodarum. There was evidence of spatial partitioning from P. antipodarum by V. humeralis at the among population scale but not the within population or patch scales. The field growth experiment indicated that interspecific net effects of P. antipodarum on V. humeralis changed in direction with increasing P. antipodarum density. Field surveys showed a similar pattern. The laboratory growth experiment indicated that direct interference competition was the negative mechanism of the species interaction and confirmed field experimental results. Stoichiometric analyses suggested that P. antipodarum juveniles require more phosphorus than V. humeralis juveniles, but that stoichiometric facilitation was not likely an interaction mechanism. Facilitated growth of V. humeralis in the presence of P. antipodarum may have been caused by increased access to food and/or P. antipodarum digestive food conditioning. Results suggest that the impact of an invasive species on the native community may be a complex interplay between invader density, native species behavior, invader nutrient use, and environmental conditions.